Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 AC087388.1-201ENST00000571370 1112 ntBASIC14.11□□□□□ -0.15
RDH8Q9NYR8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 AP000867.4-201ENST00000641616 219 ntBASIC14.11□□□□□ -0.15
RDH8Q9NYR8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RDH8Q9NYR8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 AC106881.1-201ENST00000605849 3329 ntBASIC14.1□□□□□ -0.15
RDH8Q9NYR8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 POM121L3P-201ENST00000419331 1163 ntBASIC14.1□□□□□ -0.15
RDH8Q9NYR8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 AC104819.1-201ENST00000504587 486 ntBASIC14.1□□□□□ -0.15
RDH8Q9NYR8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 AC097637.2-201ENST00000624096 1997 ntBASIC14.1□□□□□ -0.15
RDH8Q9NYR8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RDH8Q9NYR8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ME2P1-201ENST00000426028 1970 ntBASIC14.09□□□□□ -0.15
RDH8Q9NYR8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 AC010491.1-201ENST00000563101 2797 ntBASIC14.09□□□□□ -0.15
RDH8Q9NYR8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 AP000867.3-201ENST00000524675 377 ntBASIC14.09□□□□□ -0.15
RDH8Q9NYR8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms