Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 AC098614.1-201ENST00000368528 745 ntBASIC16.75■□□□□ 0.27
GKN1Q9NS71 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 AL391825.1-201ENST00000457671 1364 ntBASIC16.75■□□□□ 0.27
GKN1Q9NS71 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GKN1Q9NS71 PCDHA14-201ENST00000506751 2298 ntBASIC16.75■□□□□ 0.27
GKN1Q9NS71 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GKN1Q9NS71 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 CYP4F24P-201ENST00000586049 1580 ntBASIC16.74■□□□□ 0.27
GKN1Q9NS71 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AC114501.2-201ENST00000439631 535 ntBASIC16.74■□□□□ 0.27
GKN1Q9NS71 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 SPDYE18-201ENST00000510091 1050 ntBASIC16.74■□□□□ 0.27
GKN1Q9NS71 SDHAP3-202ENST00000515467 728 ntBASIC16.74■□□□□ 0.27
GKN1Q9NS71 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AC004790.1-201ENST00000612686 536 ntBASIC16.74■□□□□ 0.27
GKN1Q9NS71 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GKN1Q9NS71 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GKN1Q9NS71 AL662844.4-201ENST00000606367 2838 ntBASIC16.74■□□□□ 0.27
GKN1Q9NS71 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
GKN1Q9NS71 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.73■□□□□ 0.27
GKN1Q9NS71 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.73■□□□□ 0.27
GKN1Q9NS71 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GKN1Q9NS71 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.73■□□□□ 0.27
GKN1Q9NS71 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GKN1Q9NS71 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
GKN1Q9NS71 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms