Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 AC051619.7-201ENST00000568314 623 ntBASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 TUBB3P1-201ENST00000405796 1332 ntBASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A20Q9NP91 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 AL162727.3-201ENST00000635661 2787 ntBASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 AC125807.1-201ENST00000483097 614 ntBASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC6A20Q9NP91 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC6A20Q9NP91 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms