Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC093525.9-201ENST00000624961 1746 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 AC138466.4-201ENST00000623965 852 ntBASIC14.76□□□□□ -0.05
CHD8Q9HCK8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.76□□□□□ -0.05
CHD8Q9HCK8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 C2orf69P1-201ENST00000563532 1093 ntBASIC14.75□□□□□ -0.05
CHD8Q9HCK8 AC107373.2-201ENST00000607735 490 ntBASIC14.75□□□□□ -0.05
CHD8Q9HCK8 AC018695.6-201ENST00000614011 534 ntBASIC14.75□□□□□ -0.05
CHD8Q9HCK8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHD8Q9HCK8 AC087045.2-201ENST00000606279 1003 ntBASIC14.75□□□□□ -0.05
CHD8Q9HCK8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AC074138.1-201ENST00000611182 1303 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 ACTBP7-201ENST00000418351 1124 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AL354877.1-201ENST00000424412 413 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 MIR4754-201ENST00000582477 89 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AC006335.1-201ENST00000445200 547 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 PPY2P-201ENST00000582808 702 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AC006158.1-201ENST00000610661 249 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 AL353770.1-201ENST00000614915 403 ntBASIC14.74□□□□□ -0.05
CHD8Q9HCK8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CHD8Q9HCK8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AC092068.3-201ENST00000587894 2016 ntBASIC14.73□□□□□ -0.05
CHD8Q9HCK8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms