Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AL513210.1-201ENST00000629608 234 ntBASIC14.24□□□□□ -0.13
CDH20Q9HBT6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH20Q9HBT6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AC004461.1-201ENST00000412461 403 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 KRT18P32-201ENST00000424695 1287 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 CNN2P11-201ENST00000429351 262 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AP006288.1-201ENST00000446065 395 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AC093724.1-201ENST00000448659 1027 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AL138918.1-201ENST00000568306 659 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 PCDHA1-201ENST00000378133 2726 ntBASIC14.23□□□□□ -0.13
CDH20Q9HBT6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH20Q9HBT6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 AC005052.1-201ENST00000625181 2492 ntBASIC14.22□□□□□ -0.13
CDH20Q9HBT6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms