Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC025580.3-201ENST00000617932 1424 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 U82695.1-201ENST00000635752 1889 ntBASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 AC018845.2-201ENST00000568326 409 ntBASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC68Q9H2F9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 RNA5SP416-201ENST00000516838 111 ntBASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 AC120114.3-201ENST00000611923 658 ntBASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC68Q9H2F9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC68Q9H2F9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC68Q9H2F9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms