Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
MMP28Q9H239 FAM220CP-201ENST00000395253 831 ntBASIC14.41□□□□□ -0.1
MMP28Q9H239 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.41□□□□□ -0.1
MMP28Q9H239 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.41□□□□□ -0.1
MMP28Q9H239 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.41□□□□□ -0.1
MMP28Q9H239 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.41□□□□□ -0.1
MMP28Q9H239 AC074051.2-201ENST00000565115 352 ntBASIC14.41□□□□□ -0.1
MMP28Q9H239 AC012615.1-201ENST00000565797 1299 ntBASIC14.41□□□□□ -0.1
MMP28Q9H239 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP28Q9H239 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 NSUN5P1-202ENST00000421140 1535 ntBASIC14.41□□□□□ -0.1
MMP28Q9H239 NSUN5P2-203ENST00000457352 1529 ntBASIC14.41□□□□□ -0.1
MMP28Q9H239 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP28Q9H239 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP28Q9H239 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.4□□□□□ -0.1
MMP28Q9H239 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MMP28Q9H239 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP28Q9H239 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms