Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.17■□□□□ 0.5
TRIM5Q9C035 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 AC093827.2-201ENST00000512654 315 ntBASIC18.17■□□□□ 0.5
TRIM5Q9C035 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 AC074051.2-201ENST00000565115 352 ntBASIC18.17■□□□□ 0.5
TRIM5Q9C035 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 OR2I1P-210ENST00000642037 4691 ntBASIC18.17■□□□□ 0.5
TRIM5Q9C035 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM5Q9C035 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM5Q9C035 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 AL353732.1-201ENST00000569618 1459 ntBASIC18.16■□□□□ 0.5
TRIM5Q9C035 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 LINC00265-3P-201ENST00000447588 903 ntBASIC18.16■□□□□ 0.5
TRIM5Q9C035 TSSC2-201ENST00000450217 709 ntBASIC18.16■□□□□ 0.5
TRIM5Q9C035 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 AC087641.1-201ENST00000557561 1021 ntBASIC18.16■□□□□ 0.5
TRIM5Q9C035 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 AP001350.2-201ENST00000625104 1094 ntBASIC18.16■□□□□ 0.5
TRIM5Q9C035 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 AC008677.1-201ENST00000519230 1561 ntBASIC18.16■□□□□ 0.5
TRIM5Q9C035 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM5Q9C035 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM5Q9C035 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 AL022326.1-202ENST00000641533 845 ntBASIC18.15■□□□□ 0.5
TRIM5Q9C035 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM5Q9C035 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRIM5Q9C035 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms