Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 BNIP3P1-202ENST00000550043 1585 ntBASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 SOCS2P1-201ENST00000417727 557 ntBASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 AC007551.1-201ENST00000457394 519 ntBASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 RPL13AP25-201ENST00000484130 612 ntBASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTFDC1Q9BY42 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 BRWD1P1-201ENST00000401091 371 ntBASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 KRT18P64-201ENST00000434946 1219 ntBASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 AC120045.2-201ENST00000567334 178 ntBASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTFDC1Q9BY42 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC080080.1-201ENST00000625121 2420 ntBASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 BAATP1-201ENST00000412284 1225 ntBASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC009486.1-201ENST00000569860 813 ntBASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC103810.3-201ENST00000583567 96 ntBASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC244093.1-201ENST00000610837 814 ntBASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTFDC1Q9BY42 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms