Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP001282.1-201ENST00000531301 1499 ntBASIC16.93■□□□□ 0.3
SMOQ99835 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SMOQ99835 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.93■□□□□ 0.3
SMOQ99835 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SMOQ99835 AC092364.2-202ENST00000597012 1073 ntBASIC16.93■□□□□ 0.3
SMOQ99835 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMOQ99835 AC008738.7-201ENST00000609744 511 ntBASIC16.93■□□□□ 0.3
SMOQ99835 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMOQ99835 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.93■□□□□ 0.3
SMOQ99835 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.93■□□□□ 0.3
SMOQ99835 OR6D1P-203ENST00000641209 4860 ntBASIC16.93■□□□□ 0.3
SMOQ99835 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SMOQ99835 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.93■□□□□ 0.3
SMOQ99835 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SMOQ99835 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
SMOQ99835 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMOQ99835 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.92■□□□□ 0.3
SMOQ99835 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.92■□□□□ 0.3
SMOQ99835 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SMOQ99835 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.92■□□□□ 0.3
SMOQ99835 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.92■□□□□ 0.3
SMOQ99835 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.92■□□□□ 0.3
SMOQ99835 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 TSPY16P-201ENST00000449843 468 ntBASIC16.92■□□□□ 0.3
SMOQ99835 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 RN7SL618P-201ENST00000477850 296 ntBASIC16.92■□□□□ 0.3
SMOQ99835 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 MIR4745-201ENST00000577608 62 ntBASIC16.92■□□□□ 0.3
SMOQ99835 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.92■□□□□ 0.3
SMOQ99835 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
SMOQ99835 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 KRT8P37-201ENST00000451609 1420 ntBASIC16.92■□□□□ 0.3
SMOQ99835 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMOQ99835 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SMOQ99835 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMOQ99835 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMOQ99835 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMOQ99835 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 AZGP1P1-201ENST00000411909 902 ntBASIC16.91■□□□□ 0.3
SMOQ99835 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.91■□□□□ 0.3
SMOQ99835 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.91■□□□□ 0.3
SMOQ99835 SERBP1P3-201ENST00000459980 809 ntBASIC16.91■□□□□ 0.3
SMOQ99835 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms