Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 AL031432.2-201ENST00000566714 459 ntBASIC15.13■□□□□ 0.01
TM9SF2Q99805 AL928711.1-201ENST00000570165 459 ntBASIC15.13■□□□□ 0.01
TM9SF2Q99805 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 AC091812.2-201ENST00000619081 385 ntBASIC15.13■□□□□ 0.01
TM9SF2Q99805 MTHFR-217ENST00000641820 1569 ntBASIC15.13■□□□□ 0.01
TM9SF2Q99805 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF2Q99805 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF2Q99805 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AC002056.1-201ENST00000395613 760 ntBASIC15.12■□□□□ 0.01
TM9SF2Q99805 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AC107918.2-201ENST00000530817 355 ntBASIC15.12■□□□□ 0.01
TM9SF2Q99805 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AL596442.2-201ENST00000610240 980 ntBASIC15.12■□□□□ 0.01
TM9SF2Q99805 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TM9SF2Q99805 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
TM9SF2Q99805 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 ME2P1-201ENST00000426028 1970 ntBASIC15.11■□□□□ 0.01
TM9SF2Q99805 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms