Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LITAFQ99732 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.81□□□□□ -0.68
LITAFQ99732 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 AC142381.4-202ENST00000563973 229 ntBASIC10.81□□□□□ -0.68
LITAFQ99732 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC10.81□□□□□ -0.68
LITAFQ99732 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 AL353135.1-201ENST00000606729 504 ntBASIC10.81□□□□□ -0.68
LITAFQ99732 AC124864.1-201ENST00000623408 392 ntBASIC10.81□□□□□ -0.68
LITAFQ99732 AL031432.5-201ENST00000641059 760 ntBASIC10.81□□□□□ -0.68
LITAFQ99732 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
LITAFQ99732 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LITAFQ99732 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LITAFQ99732 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.8□□□□□ -0.68
LITAFQ99732 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.8□□□□□ -0.68
LITAFQ99732 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 PMS2P1-201ENST00000431037 1228 ntBASIC10.8□□□□□ -0.68
LITAFQ99732 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC10.8□□□□□ -0.68
LITAFQ99732 AC011840.4-201ENST00000578471 627 ntBASIC10.8□□□□□ -0.68
LITAFQ99732 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 SIGLEC16-201ENST00000599858 1437 ntBASIC10.8□□□□□ -0.68
LITAFQ99732 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.8□□□□□ -0.68
LITAFQ99732 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 AC136759.1-202ENST00000530858 2194 ntBASIC10.8□□□□□ -0.68
LITAFQ99732 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LITAFQ99732 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.8□□□□□ -0.68
LITAFQ99732 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LITAFQ99732 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.79□□□□□ -0.68
LITAFQ99732 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LITAFQ99732 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms