Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 KRT8P49-201ENST00000604166 1432 ntBASIC15.34■□□□□ 0.05
NR1H4Q96RI1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AL512652.2-201ENST00000625156 1716 ntBASIC15.34■□□□□ 0.05
NR1H4Q96RI1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 PCDHA3-202ENST00000532566 4594 ntBASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AC111152.3-201ENST00000569699 673 ntBASIC15.34■□□□□ 0.05
NR1H4Q96RI1 STK25P1-201ENST00000585406 838 ntBASIC15.34■□□□□ 0.05
NR1H4Q96RI1 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AC024563.2-201ENST00000603282 481 ntBASIC15.34■□□□□ 0.05
NR1H4Q96RI1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NR1H4Q96RI1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NR1H4Q96RI1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NR1H4Q96RI1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
NR1H4Q96RI1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NR1H4Q96RI1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.33■□□□□ 0.05
NR1H4Q96RI1 AC008677.1-201ENST00000519230 1561 ntBASIC15.33■□□□□ 0.05
NR1H4Q96RI1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NR1H4Q96RI1 AC112693.3-201ENST00000624819 1983 ntBASIC15.33■□□□□ 0.05
NR1H4Q96RI1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H4Q96RI1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.32■□□□□ 0.04
NR1H4Q96RI1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.32■□□□□ 0.04
NR1H4Q96RI1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms