Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 RPS2P28-201ENST00000314255 741 ntBASIC15.51■□□□□ 0.07
ITCHQ96J02 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 HMGA1P7-201ENST00000406908 502 ntBASIC15.51■□□□□ 0.07
ITCHQ96J02 MIR1224-201ENST00000408193 85 ntBASIC15.51■□□□□ 0.07
ITCHQ96J02 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.51■□□□□ 0.07
ITCHQ96J02 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.51■□□□□ 0.07
ITCHQ96J02 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.51■□□□□ 0.07
ITCHQ96J02 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 AP002414.3-201ENST00000589352 1468 ntBASIC15.51■□□□□ 0.07
ITCHQ96J02 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.51■□□□□ 0.07
ITCHQ96J02 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITCHQ96J02 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
ITCHQ96J02 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 AC092919.2-201ENST00000623631 1645 ntBASIC15.5■□□□□ 0.07
ITCHQ96J02 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.5■□□□□ 0.07
ITCHQ96J02 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ITCHQ96J02 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 CXCL1P1-201ENST00000502804 216 ntBASIC15.5■□□□□ 0.07
ITCHQ96J02 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.5■□□□□ 0.07
ITCHQ96J02 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.5■□□□□ 0.07
ITCHQ96J02 AL645728.2-201ENST00000641974 660 ntBASIC15.5■□□□□ 0.07
ITCHQ96J02 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.5■□□□□ 0.07
ITCHQ96J02 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
ITCHQ96J02 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ITCHQ96J02 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITCHQ96J02 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.49■□□□□ 0.07
ITCHQ96J02 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
ITCHQ96J02 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ITCHQ96J02 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ITCHQ96J02 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.49■□□□□ 0.07
ITCHQ96J02 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ITCHQ96J02 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITCHQ96J02 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.49■□□□□ 0.07
ITCHQ96J02 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms