Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 MRPL20P1-201ENST00000400819 433 ntBASIC14.19□□□□□ -0.14
CPNE2Q96FN4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.19□□□□□ -0.14
CPNE2Q96FN4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPNE2Q96FN4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 U82695.1-201ENST00000635752 1889 ntBASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 KRT18P27-201ENST00000427733 1299 ntBASIC14.18□□□□□ -0.14
CPNE2Q96FN4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 MIR3909-201ENST00000579518 119 ntBASIC14.18□□□□□ -0.14
CPNE2Q96FN4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPNE2Q96FN4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE2Q96FN4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE2Q96FN4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPNE2Q96FN4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms