Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.42■□□□□ 0.54
TRIM44Q96DX7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.42■□□□□ 0.54
TRIM44Q96DX7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 LINC01144-201ENST00000626198 1710 ntBASIC18.42■□□□□ 0.54
TRIM44Q96DX7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 AC009336.1-201ENST00000608941 1553 ntBASIC18.42■□□□□ 0.54
TRIM44Q96DX7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM44Q96DX7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 NCF1B-203ENST00000435988 1254 ntBASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AC073912.3-201ENST00000624414 853 ntBASIC18.41■□□□□ 0.54
TRIM44Q96DX7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AC006504.5-208ENST00000588784 2401 ntBASIC18.41■□□□□ 0.54
TRIM44Q96DX7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM44Q96DX7 AC092338.2-201ENST00000568827 1415 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 AL512652.2-201ENST00000625156 1716 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 AGAP7P-201ENST00000582299 2062 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 AGAP14-201ENST00000624701 2060 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 MROH4P-201ENST00000431302 1578 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 AC068472.1-201ENST00000474589 881 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.4■□□□□ 0.54
TRIM44Q96DX7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM44Q96DX7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms