Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KRT18P27-201ENST00000427733 1299 ntBASIC15.66■□□□□ 0.1
VPS33AQ96AX1 UPK3BP1-201ENST00000428678 509 ntBASIC15.66■□□□□ 0.1
VPS33AQ96AX1 HCG4P8-203ENST00000443049 980 ntBASIC15.66■□□□□ 0.1
VPS33AQ96AX1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 AC091304.2-201ENST00000564639 760 ntBASIC15.66■□□□□ 0.1
VPS33AQ96AX1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 AC099063.4-201ENST00000641099 1602 ntBASIC15.65■□□□□ 0.1
VPS33AQ96AX1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS33AQ96AX1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 AF238378.1-201ENST00000526806 358 ntBASIC15.64■□□□□ 0.09
VPS33AQ96AX1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 PGM5P2-202ENST00000637225 1043 ntBASIC15.64■□□□□ 0.09
VPS33AQ96AX1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.64■□□□□ 0.09
VPS33AQ96AX1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VPS33AQ96AX1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms