Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 PMS2P2-201ENST00000425039 1128 ntBASIC16.5■□□□□ 0.23
PTCD2Q8WV60 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 ZNF736P11Y-201ENST00000442535 1213 ntBASIC16.5■□□□□ 0.23
PTCD2Q8WV60 ZNF736P12Y-201ENST00000443152 1243 ntBASIC16.5■□□□□ 0.23
PTCD2Q8WV60 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 ZNF736P4Y-201ENST00000454995 1243 ntBASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 AC243562.1-201ENST00000560672 389 ntBASIC16.5■□□□□ 0.23
PTCD2Q8WV60 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 AL135744.1-201ENST00000565098 629 ntBASIC16.5■□□□□ 0.23
PTCD2Q8WV60 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCD2Q8WV60 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 TFAMP1-201ENST00000412727 736 ntBASIC16.49■□□□□ 0.23
PTCD2Q8WV60 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AC104629.1-201ENST00000494226 508 ntBASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AP000344.2-201ENST00000512987 629 ntBASIC16.49■□□□□ 0.23
PTCD2Q8WV60 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AC026120.1-201ENST00000611536 926 ntBASIC16.49■□□□□ 0.23
PTCD2Q8WV60 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.49■□□□□ 0.23
PTCD2Q8WV60 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCD2Q8WV60 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms