Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 AL603832.2-201ENST00000566195 2125 ntBASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 AC007950.2-201ENST00000615045 2347 ntBASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MIR648-201ENST00000385046 94 ntBASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MED15P5-201ENST00000423150 992 ntBASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 AL161645.1-201ENST00000622716 1255 ntBASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP1Q8TDR0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AL591424.1-201ENST00000442569 1213 ntBASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC074386.1-202ENST00000463561 864 ntBASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 PDPK2P-202ENST00000562415 1191 ntBASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC027601.4-201ENST00000611259 610 ntBASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 AC010491.1-201ENST00000563101 2797 ntBASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP1Q8TDR0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRAF3IP1Q8TDR0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP1Q8TDR0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP1Q8TDR0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRAF3IP1Q8TDR0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP1Q8TDR0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AC132872.4-202ENST00000622924 2756 ntBASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AC046158.3-201ENST00000624947 2558 ntBASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms