Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 REXO1L1P-202ENST00000608646 1974 ntBASIC17.3■□□□□ 0.36
LMO3Q8TAP4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AC254562.1-201ENST00000417586 456 ntBASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AL139010.1-201ENST00000454878 894 ntBASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AC026150.2-201ENST00000564693 1156 ntBASIC17.3■□□□□ 0.36
LMO3Q8TAP4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AC134684.3-201ENST00000641758 218 ntBASIC17.3■□□□□ 0.36
LMO3Q8TAP4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.29■□□□□ 0.36
LMO3Q8TAP4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 RBPMS2P1-201ENST00000437762 623 ntBASIC17.29■□□□□ 0.36
LMO3Q8TAP4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 AC027612.4-201ENST00000605371 583 ntBASIC17.29■□□□□ 0.36
LMO3Q8TAP4 AC018529.1-201ENST00000613063 361 ntBASIC17.29■□□□□ 0.36
LMO3Q8TAP4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMO3Q8TAP4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AC023141.5-201ENST00000458585 616 ntBASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 MIR4313-201ENST00000580760 101 ntBASIC17.28■□□□□ 0.36
LMO3Q8TAP4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMO3Q8TAP4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.28■□□□□ 0.36
LMO3Q8TAP4 AP003680.1-201ENST00000598970 3660 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms