Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC38A9Q8NBW4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 AC079328.2-201ENST00000561241 3354 ntBASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 ME2P1-201ENST00000426028 1970 ntBASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 DFFBP1-201ENST00000433250 979 ntBASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 CR383656.12-201ENST00000549567 513 ntBASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 AL691432.1-201ENST00000596308 1422 ntBASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC38A9Q8NBW4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 AD000864.1-201ENST00000624076 2295 ntBASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 DGCR5-201ENST00000399539 862 ntBASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 AC140912.1-201ENST00000577171 1054 ntBASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC38A9Q8NBW4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC38A9Q8NBW4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.21■□□□□ 0.02
SLC38A9Q8NBW4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SLC38A9Q8NBW4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms