Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 TUBB3P1-201ENST00000405796 1332 ntBASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
ZIC4Q8N9L1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AP001282.1-201ENST00000531301 1499 ntBASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AC134407.2-201ENST00000625089 1978 ntBASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AC051619.7-201ENST00000568314 623 ntBASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AC026979.3-201ENST00000607315 403 ntBASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 AL035456.1-201ENST00000456064 1369 ntBASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
ZIC4Q8N9L1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 BNIP3P1-202ENST00000550043 1585 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 CYP4F24P-201ENST00000586049 1580 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 AC004987.2-201ENST00000395959 1148 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 CNN2P2-201ENST00000443536 909 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 CNN2P3-201ENST00000450201 906 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 AC243562.2-201ENST00000561247 970 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 AL136317.3-201ENST00000618497 906 ntBASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC4Q8N9L1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms