Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 AC010319.3-201ENST00000597028 470 ntBASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 AL139099.5-201ENST00000635274 300 ntBASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 AC092053.1-201ENST00000605787 1936 ntBASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 TUBB1P2-201ENST00000422712 1306 ntBASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 TUBB1P1-201ENST00000503144 1300 ntBASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 CTBP2P3-201ENST00000585629 1255 ntBASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.71□□□□□ -0.05
RP1L1Q8IWN7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.71□□□□□ -0.06
RP1L1Q8IWN7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RP1L1Q8IWN7 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.71□□□□□ -0.06
RP1L1Q8IWN7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RP1L1Q8IWN7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
RP1L1Q8IWN7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
RP1L1Q8IWN7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 KRT223P-202ENST00000449164 1292 ntBASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 DOC2GP-202ENST00000514950 1163 ntBASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AC084346.2-201ENST00000607097 949 ntBASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AL138688.1-201ENST00000624851 1594 ntBASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 PCDHB17P-201ENST00000539533 2393 ntBASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AC021097.1-201ENST00000607902 574 ntBASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RP1L1Q8IWN7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RP1L1Q8IWN7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RP1L1Q8IWN7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms