Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF135Q8IUD6 PCDHB17P-201ENST00000539533 2393 ntBASIC17.2■□□□□ 0.34
RNF135Q8IUD6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 SLC7A15P-201ENST00000424028 1363 ntBASIC17.19■□□□□ 0.34
RNF135Q8IUD6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.19■□□□□ 0.34
RNF135Q8IUD6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 ZNF890P-202ENST00000530367 1156 ntBASIC17.19■□□□□ 0.34
RNF135Q8IUD6 SNX29P1-201ENST00000548357 1007 ntBASIC17.19■□□□□ 0.34
RNF135Q8IUD6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.19■□□□□ 0.34
RNF135Q8IUD6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF135Q8IUD6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 KRT8P44-201ENST00000441609 1350 ntBASIC17.18■□□□□ 0.34
RNF135Q8IUD6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 AC092933.1-201ENST00000393644 945 ntBASIC17.18■□□□□ 0.34
RNF135Q8IUD6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.18■□□□□ 0.34
RNF135Q8IUD6 TMEM14DP-201ENST00000422205 345 ntBASIC17.18■□□□□ 0.34
RNF135Q8IUD6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 AC091167.2-201ENST00000579581 588 ntBASIC17.18■□□□□ 0.34
RNF135Q8IUD6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 AP001350.2-201ENST00000625104 1094 ntBASIC17.18■□□□□ 0.34
RNF135Q8IUD6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF135Q8IUD6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms