Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC4Q6S5L8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AP001282.1-201ENST00000531301 1499 ntBASIC18.27■□□□□ 0.52
SHC4Q6S5L8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AC098859.1-201ENST00000502915 1238 ntBASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AL135744.1-201ENST00000565098 629 ntBASIC18.27■□□□□ 0.52
SHC4Q6S5L8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 AC092902.6-201ENST00000641783 218 ntBASIC18.27■□□□□ 0.52
SHC4Q6S5L8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.27■□□□□ 0.52
SHC4Q6S5L8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHC4Q6S5L8 AC020658.6-201ENST00000623564 1870 ntBASIC18.26■□□□□ 0.51
SHC4Q6S5L8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.26■□□□□ 0.51
SHC4Q6S5L8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 DBET-201ENST00000630918 3363 ntBASIC18.26■□□□□ 0.51
SHC4Q6S5L8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 SPTSSB-204ENST00000617024 1292 ntBASIC18.26■□□□□ 0.51
SHC4Q6S5L8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC4Q6S5L8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AKAP8P1-201ENST00000434743 1349 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 TFAMP1-201ENST00000412727 736 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AC026396.1-201ENST00000419388 421 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AC142381.1-201ENST00000426099 345 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AL671277.1-201ENST00000429656 993 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AC105233.2-201ENST00000523697 349 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AF228730.5-201ENST00000530288 346 ntBASIC18.25■□□□□ 0.51
SHC4Q6S5L8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.25■□□□□ 0.51
SHC4Q6S5L8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms