Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC004890.2-204ENST00000481968 304 ntBASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 MIR4492-201ENST00000581627 80 ntBASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 DBET-201ENST00000630918 3363 ntBASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC144BQ3MJ40 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC144BQ3MJ40 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 AC027369.6-201ENST00000525520 931 ntBASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 AC021097.1-201ENST00000607902 574 ntBASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC144BQ3MJ40 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 LINC00895-201ENST00000629028 1637 ntBASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 MRPS18AP1-201ENST00000414458 589 ntBASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 AC105233.2-201ENST00000523697 349 ntBASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 AF228730.5-201ENST00000530288 346 ntBASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 RARRES2P9-201ENST00000565168 469 ntBASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 AC018529.1-201ENST00000613063 361 ntBASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC144BQ3MJ40 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 AP3S2-216ENST00000617003 1561 ntBASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 MTHFR-217ENST00000641820 1569 ntBASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC144BQ3MJ40 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms