Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC234783.1-201ENST00000441761 496 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC007389.4-201ENST00000454674 793 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 TPRX2P-201ENST00000535362 881 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC023310.3-201ENST00000557027 670 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC100756.1-201ENST00000562736 682 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC138749.3-201ENST00000567691 622 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC116165.1-201ENST00000611806 668 ntBASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 SERBP1P3-201ENST00000459980 809 ntBASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AC123567.1-201ENST00000548294 1261 ntBASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 AC004461.2-201ENST00000629517 803 ntBASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
CTC1Q2NKJ3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AC098850.1-201ENST00000419919 790 ntBASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms