Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 MSTO2P-201ENST00000314835 1709 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AL589702.1-201ENST00000641229 1509 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 FO393414.2-201ENST00000405153 598 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 RN7SL720P-201ENST00000488178 304 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 FTLP10-202ENST00000505798 471 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AC124283.3-201ENST00000570869 594 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 CLUHP6-201ENST00000580789 941 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 LINC01115-203ENST00000606068 577 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AP003419.4-201ENST00000616071 517 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 KRT8P37-201ENST00000451609 1420 ntBASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RSPO4Q2I0M5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 INTS4P2-202ENST00000614726 2019 ntBASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RSPO4Q2I0M5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 AL133466.1-201ENST00000447582 150 ntBASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RSPO4Q2I0M5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RSPO4Q2I0M5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms