Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 AC011477.6-201ENST00000604980 1927 ntBASIC19.27■□□□□ 0.68
PDS5AQ29RF7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 HCG11-201ENST00000411553 5696 ntBASIC19.27■□□□□ 0.68
PDS5AQ29RF7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDS5AQ29RF7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.27■□□□□ 0.67
PDS5AQ29RF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PDS5AQ29RF7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.27■□□□□ 0.67
PDS5AQ29RF7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.27■□□□□ 0.67
PDS5AQ29RF7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDS5AQ29RF7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDS5AQ29RF7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AC123567.1-201ENST00000548294 1261 ntBASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
PDS5AQ29RF7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 AC098850.1-201ENST00000419919 790 ntBASIC19.25■□□□□ 0.67
PDS5AQ29RF7 MYCLP2-201ENST00000449268 967 ntBASIC19.25■□□□□ 0.67
PDS5AQ29RF7 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 AC090340.1-201ENST00000620778 4980 ntBASIC19.25■□□□□ 0.67
PDS5AQ29RF7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 SLED1-202ENST00000512051 380 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms