Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX4P78413 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX4P78413 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IRX4P78413 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX4P78413 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 AL355306.1-201ENST00000415580 579 ntBASIC16.97■□□□□ 0.31
IRX4P78413 ACTG1P4-201ENST00000425123 1122 ntBASIC16.97■□□□□ 0.31
IRX4P78413 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.97■□□□□ 0.31
IRX4P78413 AC002472.2-201ENST00000442739 958 ntBASIC16.97■□□□□ 0.31
IRX4P78413 CNN2P2-201ENST00000443536 909 ntBASIC16.97■□□□□ 0.31
IRX4P78413 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 TSPY16P-201ENST00000449843 468 ntBASIC16.97■□□□□ 0.31
IRX4P78413 CNN2P3-201ENST00000450201 906 ntBASIC16.97■□□□□ 0.31
IRX4P78413 SPDYE11-202ENST00000450699 704 ntBASIC16.97■□□□□ 0.31
IRX4P78413 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 TERF1P3-201ENST00000505638 1227 ntBASIC16.97■□□□□ 0.31
IRX4P78413 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.97■□□□□ 0.31
IRX4P78413 FAM86C2P-203ENST00000528684 1004 ntBASIC16.97■□□□□ 0.31
IRX4P78413 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.97■□□□□ 0.31
IRX4P78413 SPDYE9P-201ENST00000570642 692 ntBASIC16.97■□□□□ 0.31
IRX4P78413 RN7SL204P-201ENST00000582831 262 ntBASIC16.97■□□□□ 0.31
IRX4P78413 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 SPDYE10P-202ENST00000612005 668 ntBASIC16.97■□□□□ 0.31
IRX4P78413 SPDYE8P-202ENST00000612377 668 ntBASIC16.97■□□□□ 0.31
IRX4P78413 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 AL136317.3-201ENST00000618497 906 ntBASIC16.97■□□□□ 0.31
IRX4P78413 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.97■□□□□ 0.31
IRX4P78413 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
IRX4P78413 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 AC103702.1-201ENST00000548801 2630 ntBASIC16.97■□□□□ 0.31
IRX4P78413 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IRX4P78413 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.96■□□□□ 0.31
IRX4P78413 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.96■□□□□ 0.31
IRX4P78413 LINC00554-201ENST00000564841 3011 ntBASIC16.96■□□□□ 0.31
IRX4P78413 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
IRX4P78413 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 GK-202ENST00000378941 458 ntTSL 3 BASIC16.96■□□□□ 0.31
IRX4P78413 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
IRX4P78413 AL592309.1-201ENST00000443127 649 ntBASIC16.96■□□□□ 0.31
IRX4P78413 AC069335.1-201ENST00000489972 472 ntBASIC16.96■□□□□ 0.31
IRX4P78413 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.96■□□□□ 0.31
IRX4P78413 AC087641.1-201ENST00000557561 1021 ntBASIC16.96■□□□□ 0.31
IRX4P78413 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
IRX4P78413 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.96■□□□□ 0.31
IRX4P78413 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.96■□□□□ 0.31
IRX4P78413 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IRX4P78413 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IRX4P78413 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IRX4P78413 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
IRX4P78413 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
IRX4P78413 CYP2T1P-202ENST00000641596 2535 ntBASIC16.95■□□□□ 0.3
IRX4P78413 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms