Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.3□□□□□ -0.12
SEC61A1P61619 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 KRT18P13-201ENST00000400056 1290 ntBASIC14.3□□□□□ -0.12
SEC61A1P61619 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 AC023274.1-201ENST00000418278 595 ntBASIC14.3□□□□□ -0.12
SEC61A1P61619 BX842568.4-201ENST00000421222 227 ntBASIC14.3□□□□□ -0.12
SEC61A1P61619 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.3□□□□□ -0.12
SEC61A1P61619 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.3□□□□□ -0.12
SEC61A1P61619 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.3□□□□□ -0.12
SEC61A1P61619 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.3□□□□□ -0.12
SEC61A1P61619 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.3□□□□□ -0.12
SEC61A1P61619 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 ALOX12P2-203ENST00000570921 1945 ntBASIC14.3□□□□□ -0.12
SEC61A1P61619 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SEC61A1P61619 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.3□□□□□ -0.12
SEC61A1P61619 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SEC61A1P61619 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.29□□□□□ -0.12
SEC61A1P61619 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SEC61A1P61619 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 AP002414.1-201ENST00000391405 1147 ntBASIC14.29□□□□□ -0.12
SEC61A1P61619 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.29□□□□□ -0.12
SEC61A1P61619 CRYGEP-201ENST00000412192 528 ntBASIC14.29□□□□□ -0.12
SEC61A1P61619 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.29□□□□□ -0.12
SEC61A1P61619 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.29□□□□□ -0.12
SEC61A1P61619 AC018845.2-201ENST00000568326 409 ntBASIC14.29□□□□□ -0.12
SEC61A1P61619 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.29□□□□□ -0.12
SEC61A1P61619 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 TUBB8P12-201ENST00000308911 1335 ntBASIC14.29□□□□□ -0.12
SEC61A1P61619 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 TUBB7P-202ENST00000428444 1305 ntBASIC14.29□□□□□ -0.12
SEC61A1P61619 TUBB8P7-204ENST00000567960 1332 ntBASIC14.29□□□□□ -0.12
SEC61A1P61619 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.29□□□□□ -0.12
SEC61A1P61619 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SEC61A1P61619 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.29□□□□□ -0.12
SEC61A1P61619 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SEC61A1P61619 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61A1P61619 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms