Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAB38P57729 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB38P57729 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB38P57729 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 PMS2P2-201ENST00000425039 1128 ntBASIC15.22■□□□□ 0.03
RAB38P57729 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.22■□□□□ 0.03
RAB38P57729 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 AC125807.1-201ENST00000483097 614 ntBASIC15.22■□□□□ 0.03
RAB38P57729 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB38P57729 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.22■□□□□ 0.03
RAB38P57729 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB38P57729 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 RN7SL828P-201ENST00000607615 303 ntBASIC15.22■□□□□ 0.03
RAB38P57729 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 AL691432.1-201ENST00000596308 1422 ntBASIC15.22■□□□□ 0.03
RAB38P57729 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB38P57729 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.22■□□□□ 0.03
RAB38P57729 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB38P57729 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB38P57729 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RAB38P57729 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB38P57729 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RAB38P57729 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB38P57729 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB38P57729 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB38P57729 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB38P57729 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB38P57729 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB38P57729 AL645939.2-201ENST00000427340 991 ntBASIC15.21■□□□□ 0.03
RAB38P57729 MTND6P24-201ENST00000440466 518 ntBASIC15.21■□□□□ 0.03
RAB38P57729 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB38P57729 KLF2P3-201ENST00000451977 1087 ntBASIC15.21■□□□□ 0.03
RAB38P57729 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.21■□□□□ 0.03
RAB38P57729 AC051619.7-201ENST00000568314 623 ntBASIC15.21■□□□□ 0.03
RAB38P57729 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.21■□□□□ 0.03
RAB38P57729 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB38P57729 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB38P57729 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAB38P57729 DOC2GP-204ENST00000639052 2548 ntBASIC15.21■□□□□ 0.03
RAB38P57729 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms