Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP1S2P56377 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S2P56377 FOXO1B-201ENST00000504678 1527 ntBASIC15.82■□□□□ 0.12
AP1S2P56377 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP1S2P56377 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S2P56377 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S2P56377 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.82■□□□□ 0.12
AP1S2P56377 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP1S2P56377 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.82■□□□□ 0.12
AP1S2P56377 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.82■□□□□ 0.12
AP1S2P56377 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP1S2P56377 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.81■□□□□ 0.12
AP1S2P56377 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
AP1S2P56377 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
AP1S2P56377 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S2P56377 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.81■□□□□ 0.12
AP1S2P56377 FAM220BP-201ENST00000377689 816 ntBASIC15.81■□□□□ 0.12
AP1S2P56377 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP1S2P56377 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S2P56377 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S2P56377 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP1S2P56377 YBX1P5-201ENST00000509441 847 ntBASIC15.81■□□□□ 0.12
AP1S2P56377 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.81■□□□□ 0.12
AP1S2P56377 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S2P56377 AP001282.1-201ENST00000531301 1499 ntBASIC15.81■□□□□ 0.12
AP1S2P56377 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.81■□□□□ 0.12
AP1S2P56377 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP1S2P56377 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
AP1S2P56377 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.81■□□□□ 0.12
AP1S2P56377 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.81■□□□□ 0.12
AP1S2P56377 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP1S2P56377 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
AP1S2P56377 AC112504.1-201ENST00000623415 1841 ntBASIC15.81■□□□□ 0.12
AP1S2P56377 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP1S2P56377 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP1S2P56377 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.8■□□□□ 0.12
AP1S2P56377 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S2P56377 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 CEND1P1-201ENST00000451006 455 ntBASIC15.8■□□□□ 0.12
AP1S2P56377 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.8■□□□□ 0.12
AP1S2P56377 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.8■□□□□ 0.12
AP1S2P56377 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S2P56377 MIR3687-2-201ENST00000577708 61 ntBASIC15.8■□□□□ 0.12
AP1S2P56377 AC061975.2-201ENST00000581722 295 ntBASIC15.8■□□□□ 0.12
AP1S2P56377 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.8■□□□□ 0.12
AP1S2P56377 MIR3687-1-201ENST00000614492 61 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms