Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SLC25A1P53007 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 MRPL3P1-201ENST00000400109 1033 ntBASIC14.42□□□□□ -0.1
SLC25A1P53007 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC25A1P53007 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 AL662844.1-201ENST00000546340 181 ntBASIC14.42□□□□□ -0.1
SLC25A1P53007 AL161645.1-201ENST00000622716 1255 ntBASIC14.42□□□□□ -0.1
SLC25A1P53007 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC25A1P53007 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 PPT1-215ENST00000641471 2368 ntBASIC14.42□□□□□ -0.1
SLC25A1P53007 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC25A1P53007 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC25A1P53007 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC25A1P53007 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC25A1P53007 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SLC25A1P53007 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC25A1P53007 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AC025580.3-201ENST00000617932 1424 ntBASIC14.41□□□□□ -0.1
SLC25A1P53007 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 GPX1P2-201ENST00000429271 606 ntBASIC14.41□□□□□ -0.1
SLC25A1P53007 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC25A1P53007 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AC004877.2-201ENST00000623941 599 ntBASIC14.41□□□□□ -0.1
SLC25A1P53007 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 AC006058.4-201ENST00000624016 1670 ntBASIC14.41□□□□□ -0.1
SLC25A1P53007 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLC25A1P53007 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 SSR4P1-203ENST00000599569 2260 ntBASIC14.41□□□□□ -0.1
SLC25A1P53007 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC25A1P53007 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC25A1P53007 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC25A1P53007 BCAR1-209ENST00000546196 1340 ntBASIC14.41□□□□□ -0.1
SLC25A1P53007 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SLC25A1P53007 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC25A1P53007 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC25A1P53007 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC25A1P53007 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms