Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF144AP50876 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF144AP50876 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF144AP50876 LINC01144-201ENST00000626198 1710 ntBASIC15.15■□□□□ 0.02
RNF144AP50876 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 AL591424.1-201ENST00000442569 1213 ntBASIC15.15■□□□□ 0.02
RNF144AP50876 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF144AP50876 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF144AP50876 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.15■□□□□ 0.02
RNF144AP50876 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF144AP50876 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.15■□□□□ 0.02
RNF144AP50876 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF144AP50876 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF144AP50876 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF144AP50876 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF144AP50876 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 PMS2P4-201ENST00000412466 1052 ntBASIC15.14■□□□□ 0.01
RNF144AP50876 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF144AP50876 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 KRT18P58-201ENST00000527480 1120 ntBASIC15.14■□□□□ 0.01
RNF144AP50876 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RNF144AP50876 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF144AP50876 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF144AP50876 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF144AP50876 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF144AP50876 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF144AP50876 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF144AP50876 AC091812.2-201ENST00000619081 385 ntBASIC15.14■□□□□ 0.01
RNF144AP50876 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
RNF144AP50876 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF144AP50876 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF144AP50876 AC103702.1-201ENST00000548801 2630 ntBASIC15.13■□□□□ 0.01
RNF144AP50876 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF144AP50876 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms