Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AL033527.5-201ENST00000641382 801 ntBASIC19.18■□□□□ 0.66
TNNI2P48788 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.18■□□□□ 0.66
TNNI2P48788 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TNNI2P48788 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.18■□□□□ 0.66
TNNI2P48788 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
TNNI2P48788 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TNNI2P48788 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNI2P48788 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TNNI2P48788 AL603756.1-201ENST00000606511 2163 ntBASIC19.17■□□□□ 0.66
TNNI2P48788 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TNNI2P48788 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNNI2P48788 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.17■□□□□ 0.66
TNNI2P48788 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.17■□□□□ 0.66
TNNI2P48788 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TNNI2P48788 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.17■□□□□ 0.66
TNNI2P48788 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNNI2P48788 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.17■□□□□ 0.66
TNNI2P48788 MIR8072-201ENST00000614241 80 ntBASIC19.17■□□□□ 0.66
TNNI2P48788 RNF216P1-203ENST00000404404 2427 ntBASIC19.17■□□□□ 0.66
TNNI2P48788 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNI2P48788 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 AL136982.4-201ENST00000437689 1740 ntBASIC19.17■□□□□ 0.66
TNNI2P48788 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNI2P48788 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNNI2P48788 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.16■□□□□ 0.66
TNNI2P48788 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.16■□□□□ 0.66
TNNI2P48788 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.16■□□□□ 0.66
TNNI2P48788 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.16■□□□□ 0.66
TNNI2P48788 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNNI2P48788 AC015936.2-201ENST00000593177 259 ntBASIC19.16■□□□□ 0.66
TNNI2P48788 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.16■□□□□ 0.66
TNNI2P48788 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TNNI2P48788 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNNI2P48788 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.16■□□□□ 0.66
TNNI2P48788 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNI2P48788 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNNI2P48788 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNNI2P48788 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms