Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT6CP48668 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT6CP48668 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.8■□□□□ 0.12
KRT6CP48668 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6CP48668 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT6CP48668 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
KRT6CP48668 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.8■□□□□ 0.12
KRT6CP48668 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT6CP48668 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 AC069224.1-201ENST00000566372 1715 ntBASIC15.8■□□□□ 0.12
KRT6CP48668 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KRT6CP48668 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT6CP48668 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6CP48668 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6CP48668 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
KRT6CP48668 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
KRT6CP48668 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT6CP48668 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
KRT6CP48668 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT6CP48668 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
KRT6CP48668 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6CP48668 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KRT6CP48668 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KRT6CP48668 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
KRT6CP48668 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6CP48668 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KRT6CP48668 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 AC112504.1-201ENST00000623415 1841 ntBASIC15.78■□□□□ 0.12
KRT6CP48668 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT6CP48668 HLA-A-201ENST00000376802 1334 ntBASIC15.78■□□□□ 0.12
KRT6CP48668 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 AC093724.1-201ENST00000448659 1027 ntBASIC15.78■□□□□ 0.12
KRT6CP48668 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT6CP48668 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT6CP48668 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT6CP48668 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.78■□□□□ 0.12
KRT6CP48668 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT6CP48668 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.78■□□□□ 0.12
KRT6CP48668 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 AL078644.1-201ENST00000609881 752 ntBASIC15.78■□□□□ 0.12
KRT6CP48668 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6CP48668 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT6CP48668 AC126755.1-201ENST00000525846 6405 ntBASIC15.78■□□□□ 0.12
KRT6CP48668 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms