Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.93■□□□□ 0.3
MTHFRP42898 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
MTHFRP42898 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.93■□□□□ 0.3
MTHFRP42898 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.93■□□□□ 0.3
MTHFRP42898 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 RARRES2P5-201ENST00000564013 466 ntBASIC16.93■□□□□ 0.3
MTHFRP42898 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MTHFRP42898 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
MTHFRP42898 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MTHFRP42898 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MTHFRP42898 CLK3P2-201ENST00000427566 1453 ntBASIC16.93■□□□□ 0.3
MTHFRP42898 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
MTHFRP42898 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
MTHFRP42898 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.92■□□□□ 0.3
MTHFRP42898 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 AL133338.1-201ENST00000565695 1517 ntBASIC16.92■□□□□ 0.3
MTHFRP42898 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.92■□□□□ 0.3
MTHFRP42898 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
MTHFRP42898 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.92■□□□□ 0.3
MTHFRP42898 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.92■□□□□ 0.3
MTHFRP42898 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.92■□□□□ 0.3
MTHFRP42898 AP002490.2-201ENST00000524791 560 ntBASIC16.92■□□□□ 0.3
MTHFRP42898 BTNL10-201ENST00000595971 695 ntBASIC16.92■□□□□ 0.3
MTHFRP42898 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MTHFRP42898 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MTHFRP42898 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MTHFRP42898 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.92■□□□□ 0.3
MTHFRP42898 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MTHFRP42898 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MTHFRP42898 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.92■□□□□ 0.3
MTHFRP42898 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
MTHFRP42898 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
MTHFRP42898 BNIP3P42-201ENST00000454982 569 ntBASIC16.91■□□□□ 0.3
MTHFRP42898 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 CROCCP4-201ENST00000457096 498 ntBASIC16.91■□□□□ 0.3
MTHFRP42898 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.91■□□□□ 0.3
MTHFRP42898 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.91■□□□□ 0.3
MTHFRP42898 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.91■□□□□ 0.3
MTHFRP42898 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 AC010319.3-201ENST00000597028 470 ntBASIC16.91■□□□□ 0.3
MTHFRP42898 BNIP3P29-201ENST00000598302 571 ntBASIC16.91■□□□□ 0.3
MTHFRP42898 AC084346.2-201ENST00000607097 949 ntBASIC16.91■□□□□ 0.3
MTHFRP42898 AC011447.5-201ENST00000616168 564 ntBASIC16.91■□□□□ 0.3
MTHFRP42898 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MTHFRP42898 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MTHFRP42898 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
MTHFRP42898 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MTHFRP42898 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MTHFRP42898 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MTHFRP42898 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MTHFRP42898 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms