Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE6BP35913 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PDE6BP35913 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDE6BP35913 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE6BP35913 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 AP001063.1-201ENST00000568332 529 ntBASIC19.79■□□□□ 0.76
PDE6BP35913 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE6BP35913 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.79■□□□□ 0.76
PDE6BP35913 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE6BP35913 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6BP35913 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PDE6BP35913 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.78■□□□□ 0.76
PDE6BP35913 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PDE6BP35913 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDE6BP35913 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE6BP35913 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.78■□□□□ 0.76
PDE6BP35913 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE6BP35913 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE6BP35913 RPL13AP20-201ENST00000459725 609 ntBASIC19.78■□□□□ 0.76
PDE6BP35913 DUX4L45-201ENST00000566406 1057 ntBASIC19.78■□□□□ 0.76
PDE6BP35913 RN7SL560P-201ENST00000577943 264 ntBASIC19.78■□□□□ 0.76
PDE6BP35913 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.78■□□□□ 0.76
PDE6BP35913 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.78■□□□□ 0.76
PDE6BP35913 RHOXF1P1-202ENST00000635473 501 ntBASIC19.78■□□□□ 0.76
PDE6BP35913 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDE6BP35913 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6BP35913 PP12613-201ENST00000424958 2230 ntBASIC19.78■□□□□ 0.76
PDE6BP35913 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PDE6BP35913 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE6BP35913 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 AC026954.1-201ENST00000429771 1293 ntBASIC19.77■□□□□ 0.76
PDE6BP35913 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.77■□□□□ 0.76
PDE6BP35913 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.77■□□□□ 0.76
PDE6BP35913 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.77■□□□□ 0.76
PDE6BP35913 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDE6BP35913 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.77■□□□□ 0.76
PDE6BP35913 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
PDE6BP35913 AC009542.2-202ENST00000619004 1067 ntBASIC19.77■□□□□ 0.76
PDE6BP35913 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PDE6BP35913 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE6BP35913 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE6BP35913 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.77■□□□□ 0.76
PDE6BP35913 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.77■□□□□ 0.76
PDE6BP35913 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE6BP35913 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDE6BP35913 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.77■□□□□ 0.75
PDE6BP35913 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDE6BP35913 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE6BP35913 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDE6BP35913 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDE6BP35913 AC012313.1-201ENST00000593393 3059 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDE6BP35913 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.76■□□□□ 0.75
PDE6BP35913 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE6BP35913 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDE6BP35913 AC093433.1-201ENST00000458048 571 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 VDAC1P7-201ENST00000462417 847 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.76■□□□□ 0.75
PDE6BP35913 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6BP35913 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.76■□□□□ 0.75
PDE6BP35913 AC091271.1-201ENST00000611877 1162 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 AC244669.2-201ENST00000612320 853 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.76■□□□□ 0.75
PDE6BP35913 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDE6BP35913 AC008687.7-202ENST00000637404 953 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms