Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 IL9RP2-201ENST00000423948 1312 ntBASIC16.76■□□□□ 0.27
PTPN7P35236 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 AC098859.1-201ENST00000502915 1238 ntBASIC16.76■□□□□ 0.27
PTPN7P35236 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.76■□□□□ 0.27
PTPN7P35236 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 RARRES2P8-201ENST00000566335 367 ntBASIC16.76■□□□□ 0.27
PTPN7P35236 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN7P35236 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN7P35236 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 AL513190.1-201ENST00000621254 727 ntBASIC16.76■□□□□ 0.27
PTPN7P35236 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN7P35236 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN7P35236 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN7P35236 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN7P35236 FOXO1B-201ENST00000504678 1527 ntBASIC16.75■□□□□ 0.27
PTPN7P35236 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN7P35236 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN7P35236 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN7P35236 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 AC105233.2-201ENST00000523697 349 ntBASIC16.75■□□□□ 0.27
PTPN7P35236 AF228730.5-201ENST00000530288 346 ntBASIC16.75■□□□□ 0.27
PTPN7P35236 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.75■□□□□ 0.27
PTPN7P35236 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.75■□□□□ 0.27
PTPN7P35236 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN7P35236 AC061975.2-201ENST00000581722 295 ntBASIC16.75■□□□□ 0.27
PTPN7P35236 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PTPN7P35236 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTPN7P35236 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN7P35236 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN7P35236 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN7P35236 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.74■□□□□ 0.27
PTPN7P35236 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTPN7P35236 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PTPN7P35236 AKAP8P1-201ENST00000434743 1349 ntBASIC16.74■□□□□ 0.27
PTPN7P35236 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN7P35236 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN7P35236 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN7P35236 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms