Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 SNX33P1-201ENST00000592116 1762 ntBASIC12□□□□□ -0.49
CKS2P33552 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CKS2P33552 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 AC106881.1-201ENST00000605849 3329 ntBASIC12□□□□□ -0.49
CKS2P33552 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 AC087481.3-201ENST00000602886 1894 ntBASIC12□□□□□ -0.49
CKS2P33552 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12□□□□□ -0.49
CKS2P33552 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12□□□□□ -0.49
CKS2P33552 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 COX11P1-201ENST00000489116 835 ntBASIC12□□□□□ -0.49
CKS2P33552 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CKS2P33552 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12□□□□□ -0.49
CKS2P33552 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
CKS2P33552 AC009533.2-201ENST00000543664 586 ntBASIC12□□□□□ -0.49
CKS2P33552 AL441883.1-201ENST00000566170 1045 ntBASIC12□□□□□ -0.49
CKS2P33552 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CKS2P33552 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 AL138966.2-201ENST00000621997 464 ntBASIC12□□□□□ -0.49
CKS2P33552 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12□□□□□ -0.49
CKS2P33552 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12□□□□□ -0.49
CKS2P33552 GPAA1P2-202ENST00000606848 1787 ntBASIC12□□□□□ -0.49
CKS2P33552 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CKS2P33552 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CKS2P33552 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.99□□□□□ -0.49
CKS2P33552 PTENP1-202ENST00000532280 3996 ntBASIC11.99□□□□□ -0.49
CKS2P33552 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.99□□□□□ -0.49
CKS2P33552 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.99□□□□□ -0.49
CKS2P33552 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.99□□□□□ -0.49
CKS2P33552 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.99□□□□□ -0.49
CKS2P33552 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.99□□□□□ -0.49
CKS2P33552 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.99□□□□□ -0.49
CKS2P33552 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.99□□□□□ -0.49
CKS2P33552 AC005336.2-201ENST00000593183 939 ntBASIC11.99□□□□□ -0.49
CKS2P33552 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.99□□□□□ -0.49
CKS2P33552 KRT18P22-201ENST00000402024 1347 ntBASIC11.99□□□□□ -0.49
CKS2P33552 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 AC243591.1-201ENST00000452967 1364 ntBASIC11.99□□□□□ -0.49
CKS2P33552 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CKS2P33552 LINC01568-207ENST00000641790 1380 ntBASIC11.99□□□□□ -0.49
CKS2P33552 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms