Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.34■□□□□ 0.21
LSP1P33241 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LSP1P33241 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.34■□□□□ 0.21
LSP1P33241 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LSP1P33241 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LSP1P33241 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LSP1P33241 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.33■□□□□ 0.21
LSP1P33241 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LSP1P33241 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LSP1P33241 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LSP1P33241 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LSP1P33241 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
LSP1P33241 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 STARP1-201ENST00000397973 869 ntBASIC16.33■□□□□ 0.2
LSP1P33241 LINC00982-205ENST00000420957 435 ntBASIC16.33■□□□□ 0.2
LSP1P33241 LINC01238-205ENST00000567549 1107 ntBASIC16.33■□□□□ 0.2
LSP1P33241 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.33■□□□□ 0.2
LSP1P33241 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.33■□□□□ 0.2
LSP1P33241 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.33■□□□□ 0.2
LSP1P33241 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
LSP1P33241 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LSP1P33241 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.33■□□□□ 0.2
LSP1P33241 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LSP1P33241 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSP1P33241 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 AL845331.1-201ENST00000424978 1190 ntBASIC16.32■□□□□ 0.2
LSP1P33241 AL137013.1-201ENST00000432946 1228 ntBASIC16.32■□□□□ 0.2
LSP1P33241 AL359075.1-203ENST00000462729 1002 ntBASIC16.32■□□□□ 0.2
LSP1P33241 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.32■□□□□ 0.2
LSP1P33241 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.32■□□□□ 0.2
LSP1P33241 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.32■□□□□ 0.2
LSP1P33241 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 AL138966.2-201ENST00000621997 464 ntBASIC16.32■□□□□ 0.2
LSP1P33241 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 AC005622.1-201ENST00000636801 1703 ntBASIC16.32■□□□□ 0.2
LSP1P33241 AC097493.4-201ENST00000641197 219 ntBASIC16.32■□□□□ 0.2
LSP1P33241 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LSP1P33241 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSP1P33241 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms