Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC12P31275 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.44□□□□□ -0.1
HOXC12P31275 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC12P31275 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXC12P31275 AC140878.1-201ENST00000565277 250 ntBASIC14.44□□□□□ -0.1
HOXC12P31275 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HOXC12P31275 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC12P31275 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HOXC12P31275 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.44□□□□□ -0.1
HOXC12P31275 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC12P31275 SNX33P1-201ENST00000592116 1762 ntBASIC14.44□□□□□ -0.1
HOXC12P31275 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
HOXC12P31275 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 AD000864.1-201ENST00000624076 2295 ntBASIC14.44□□□□□ -0.1
HOXC12P31275 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC12P31275 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HOXC12P31275 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HOXC12P31275 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC12P31275 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HOXC12P31275 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 GPS2P2-201ENST00000430745 888 ntBASIC14.43□□□□□ -0.1
HOXC12P31275 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXC12P31275 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 CR383656.12-201ENST00000549567 513 ntBASIC14.43□□□□□ -0.1
HOXC12P31275 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXC12P31275 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
HOXC12P31275 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 HLA-A-202ENST00000376806 1854 ntBASIC14.43□□□□□ -0.1
HOXC12P31275 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HOXC12P31275 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC12P31275 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXC12P31275 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC12P31275 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXC12P31275 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 AC078925.2-201ENST00000624013 1973 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXC12P31275 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms