Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CNGA1P29973 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.42■□□□□ 0.54
CNGA1P29973 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.42■□□□□ 0.54
CNGA1P29973 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 AC092658.1-201ENST00000505836 891 ntBASIC18.42■□□□□ 0.54
CNGA1P29973 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.42■□□□□ 0.54
CNGA1P29973 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.42■□□□□ 0.54
CNGA1P29973 AC026979.3-201ENST00000607315 403 ntBASIC18.42■□□□□ 0.54
CNGA1P29973 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.42■□□□□ 0.54
CNGA1P29973 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.42■□□□□ 0.54
CNGA1P29973 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.42■□□□□ 0.54
CNGA1P29973 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNGA1P29973 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.42■□□□□ 0.54
CNGA1P29973 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.42■□□□□ 0.54
CNGA1P29973 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNGA1P29973 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNGA1P29973 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CNGA1P29973 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.41■□□□□ 0.54
CNGA1P29973 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 TMEM14DP-201ENST00000422205 345 ntBASIC18.41■□□□□ 0.54
CNGA1P29973 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 ELK1P1-201ENST00000485699 580 ntBASIC18.41■□□□□ 0.54
CNGA1P29973 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.41■□□□□ 0.54
CNGA1P29973 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.41■□□□□ 0.54
CNGA1P29973 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.41■□□□□ 0.54
CNGA1P29973 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.41■□□□□ 0.54
CNGA1P29973 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNGA1P29973 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
CNGA1P29973 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.41■□□□□ 0.54
CNGA1P29973 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
CNGA1P29973 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.4■□□□□ 0.54
CNGA1P29973 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CNGA1P29973 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
CNGA1P29973 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.4■□□□□ 0.54
CNGA1P29973 AL589987.1-201ENST00000453380 819 ntBASIC18.4■□□□□ 0.54
CNGA1P29973 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.4■□□□□ 0.54
CNGA1P29973 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.4■□□□□ 0.54
CNGA1P29973 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.4■□□□□ 0.54
CNGA1P29973 AC092552.1-201ENST00000547243 906 ntBASIC18.4■□□□□ 0.54
CNGA1P29973 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.4■□□□□ 0.54
CNGA1P29973 MIR4259-201ENST00000584466 101 ntBASIC18.4■□□□□ 0.54
CNGA1P29973 MIR6069-201ENST00000620069 79 ntBASIC18.4■□□□□ 0.54
CNGA1P29973 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.4■□□□□ 0.54
CNGA1P29973 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.4■□□□□ 0.54
CNGA1P29973 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNGA1P29973 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms