Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL1P22362 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CCL1P22362 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL1P22362 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 AKAP8P1-201ENST00000434743 1349 ntBASIC13.94□□□□□ -0.18
CCL1P22362 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL1P22362 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 RPL13AP23-201ENST00000480739 586 ntBASIC13.94□□□□□ -0.18
CCL1P22362 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL1P22362 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CCL1P22362 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCL1P22362 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.94□□□□□ -0.18
CCL1P22362 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL1P22362 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL1P22362 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.94□□□□□ -0.18
CCL1P22362 AC024267.1-201ENST00000582320 895 ntBASIC13.94□□□□□ -0.18
CCL1P22362 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL1P22362 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCL1P22362 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 FOXO1B-201ENST00000504678 1527 ntBASIC13.94□□□□□ -0.18
CCL1P22362 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL1P22362 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL1P22362 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCL1P22362 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
CCL1P22362 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 LINC00554-201ENST00000564841 3011 ntBASIC13.93□□□□□ -0.18
CCL1P22362 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.93□□□□□ -0.18
CCL1P22362 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL1P22362 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.93□□□□□ -0.18
CCL1P22362 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL1P22362 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL1P22362 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms