Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 SLC22A20-204ENST00000530038 1673 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 POM121L3P-201ENST00000419331 1163 ntBASIC14.28□□□□□ -0.12
RAB3BP20337 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB3BP20337 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.28□□□□□ -0.12
RAB3BP20337 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 AL353732.1-201ENST00000569618 1459 ntBASIC14.28□□□□□ -0.12
RAB3BP20337 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RAB3BP20337 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 AC064862.7-201ENST00000604520 867 ntBASIC14.28□□□□□ -0.12
RAB3BP20337 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RAB3BP20337 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB3BP20337 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB3BP20337 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB3BP20337 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB3BP20337 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB3BP20337 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB3BP20337 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB3BP20337 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB3BP20337 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB3BP20337 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB3BP20337 AC008677.1-201ENST00000519230 1561 ntBASIC14.27□□□□□ -0.12
RAB3BP20337 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB3BP20337 AC097376.2-205ENST00000610159 5334 ntBASIC14.27□□□□□ -0.12
RAB3BP20337 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB3BP20337 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAB3BP20337 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB3BP20337 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB3BP20337 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3BP20337 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB3BP20337 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3BP20337 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB3BP20337 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB3BP20337 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms