Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHRM3P20309 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
CHRM3P20309 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRM3P20309 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.21■□□□□ 0.18
CHRM3P20309 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.21■□□□□ 0.18
CHRM3P20309 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.21■□□□□ 0.18
CHRM3P20309 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CHRM3P20309 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHRM3P20309 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CHRM3P20309 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.21■□□□□ 0.18
CHRM3P20309 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.18
CHRM3P20309 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRM3P20309 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRM3P20309 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRM3P20309 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CHRM3P20309 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRM3P20309 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRM3P20309 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CHRM3P20309 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 AC105917.1-201ENST00000506637 2539 ntBASIC16.2■□□□□ 0.18
CHRM3P20309 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 AC073439.1-201ENST00000624121 1774 ntBASIC16.2■□□□□ 0.18
CHRM3P20309 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRM3P20309 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CHRM3P20309 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRM3P20309 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CHRM3P20309 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.19■□□□□ 0.18
CHRM3P20309 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 AC093724.1-201ENST00000448659 1027 ntBASIC16.19■□□□□ 0.18
CHRM3P20309 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRM3P20309 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 AC002347.1-201ENST00000569543 541 ntBASIC16.19■□□□□ 0.18
CHRM3P20309 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.19■□□□□ 0.18
CHRM3P20309 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.19■□□□□ 0.18
CHRM3P20309 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 NORAD-201ENST00000565493 5339 ntBASIC16.19■□□□□ 0.18
CHRM3P20309 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CHRM3P20309 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRM3P20309 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRM3P20309 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRM3P20309 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRM3P20309 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRM3P20309 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRM3P20309 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms