Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PTPN1P18031 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN1P18031 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN1P18031 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN1P18031 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN1P18031 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN1P18031 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PTPN1P18031 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN1P18031 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 AL080243.2-201ENST00000418783 582 ntBASIC17.13■□□□□ 0.33
PTPN1P18031 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 BCRP1-201ENST00000444246 691 ntBASIC17.13■□□□□ 0.33
PTPN1P18031 AL512638.1-201ENST00000457493 794 ntBASIC17.13■□□□□ 0.33
PTPN1P18031 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN1P18031 INGX-202ENST00000489074 768 ntBASIC17.13■□□□□ 0.33
PTPN1P18031 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN1P18031 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PTPN1P18031 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN1P18031 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PTPN1P18031 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PTPN1P18031 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN1P18031 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN1P18031 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN1P18031 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN1P18031 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN1P18031 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.12■□□□□ 0.33
PTPN1P18031 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN1P18031 TSSK5P-201ENST00000423978 907 ntBASIC17.12■□□□□ 0.33
PTPN1P18031 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.12■□□□□ 0.33
PTPN1P18031 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN1P18031 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN1P18031 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN1P18031 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 PCDHB19P-201ENST00000570871 2371 ntBASIC17.12■□□□□ 0.33
PTPN1P18031 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.12■□□□□ 0.33
PTPN1P18031 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 KRT8P12-202ENST00000472924 1397 ntBASIC17.12■□□□□ 0.33
PTPN1P18031 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN1P18031 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN1P18031 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN1P18031 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.11■□□□□ 0.33
PTPN1P18031 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 CYP4F24P-201ENST00000586049 1580 ntBASIC17.11■□□□□ 0.33
PTPN1P18031 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 AC006449.5-201ENST00000610658 2098 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms