Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 POU5F1P6-201ENST00000466990 990 ntBASIC15.21■□□□□ 0.03
CCL4P13236 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL4P13236 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL4P13236 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL4P13236 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL4P13236 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL4P13236 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCL4P13236 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL4P13236 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL4P13236 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCL4P13236 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 AL592424.1-201ENST00000563624 1536 ntBASIC15.21■□□□□ 0.03
CCL4P13236 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CCL4P13236 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL4P13236 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.21■□□□□ 0.02
CCL4P13236 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL4P13236 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCL4P13236 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCL4P13236 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
CCL4P13236 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CCL4P13236 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCL4P13236 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.2■□□□□ 0.02
CCL4P13236 AC005052.1-201ENST00000625181 2492 ntBASIC15.2■□□□□ 0.02
CCL4P13236 KRT8P37-201ENST00000451609 1420 ntBASIC15.2■□□□□ 0.02
CCL4P13236 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL4P13236 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL4P13236 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.2■□□□□ 0.02
CCL4P13236 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.2■□□□□ 0.02
CCL4P13236 AC234783.1-201ENST00000441761 496 ntBASIC15.2■□□□□ 0.02
CCL4P13236 AC119751.2-201ENST00000504529 210 ntBASIC15.2■□□□□ 0.02
CCL4P13236 SNX29P1-201ENST00000548357 1007 ntBASIC15.2■□□□□ 0.02
CCL4P13236 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.2■□□□□ 0.02
CCL4P13236 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.2■□□□□ 0.02
CCL4P13236 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.2■□□□□ 0.02
CCL4P13236 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL4P13236 AC010319.3-201ENST00000597028 470 ntBASIC15.2■□□□□ 0.02
CCL4P13236 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCL4P13236 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.2■□□□□ 0.02
CCL4P13236 MIR6775-201ENST00000617557 69 ntBASIC15.2■□□□□ 0.02
CCL4P13236 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCL4P13236 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCL4P13236 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL4P13236 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCL4P13236 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCL4P13236 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCL4P13236 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCL4P13236 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.19■□□□□ 0.02
CCL4P13236 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.19■□□□□ 0.02
CCL4P13236 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.19■□□□□ 0.02
CCL4P13236 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CCL4P13236 AC243562.2-201ENST00000561247 970 ntBASIC15.19■□□□□ 0.02
CCL4P13236 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.19■□□□□ 0.02
CCL4P13236 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 AL391069.4-201ENST00000609583 481 ntBASIC15.19■□□□□ 0.02
CCL4P13236 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.19■□□□□ 0.02
CCL4P13236 AL158212.4-201ENST00000624062 1286 ntBASIC15.19■□□□□ 0.02
CCL4P13236 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCL4P13236 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCL4P13236 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms