Protein–RNA interactions for Protein: P10071

GLI3, Transcriptional activator GLI3, humanhuman

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3P10071 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GLI3P10071 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.97■□□□□ 0.95
GLI3P10071 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.97■□□□□ 0.95
GLI3P10071 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GLI3P10071 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 AC044849.1-201ENST00000519737 1188 ntBASIC20.97■□□□□ 0.95
GLI3P10071 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.97■□□□□ 0.95
GLI3P10071 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.97■□□□□ 0.95
GLI3P10071 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.97■□□□□ 0.95
GLI3P10071 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GLI3P10071 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GLI3P10071 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.97■□□□□ 0.95
GLI3P10071 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.97■□□□□ 0.95
GLI3P10071 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GLI3P10071 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.97■□□□□ 0.95
GLI3P10071 AC007274.2-201ENST00000421675 662 ntBASIC20.97■□□□□ 0.95
GLI3P10071 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.97■□□□□ 0.95
GLI3P10071 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.97■□□□□ 0.95
GLI3P10071 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.97■□□□□ 0.95
GLI3P10071 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
GLI3P10071 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
GLI3P10071 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.96■□□□□ 0.95
GLI3P10071 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.96■□□□□ 0.95
GLI3P10071 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.96■□□□□ 0.95
GLI3P10071 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.96■□□□□ 0.95
GLI3P10071 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.96■□□□□ 0.95
GLI3P10071 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.96■□□□□ 0.95
GLI3P10071 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.96■□□□□ 0.95
GLI3P10071 KRT18P66-201ENST00000452970 1269 ntBASIC20.96■□□□□ 0.95
GLI3P10071 AC104784.1-201ENST00000473096 294 ntBASIC20.96■□□□□ 0.95
GLI3P10071 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.96■□□□□ 0.95
GLI3P10071 AC026410.3-201ENST00000514280 936 ntBASIC20.96■□□□□ 0.95
GLI3P10071 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.96■□□□□ 0.95
GLI3P10071 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.96■□□□□ 0.95
GLI3P10071 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.96■□□□□ 0.95
GLI3P10071 CU633904.3-201ENST00000624042 1029 ntBASIC20.96■□□□□ 0.95
GLI3P10071 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GLI3P10071 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GLI3P10071 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.96■□□□□ 0.95
GLI3P10071 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.96■□□□□ 0.95
GLI3P10071 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GLI3P10071 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
GLI3P10071 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.95■□□□□ 0.94
GLI3P10071 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.95■□□□□ 0.94
GLI3P10071 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
GLI3P10071 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.95■□□□□ 0.94
GLI3P10071 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.95■□□□□ 0.94
GLI3P10071 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
GLI3P10071 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
GLI3P10071 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GLI3P10071 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.95■□□□□ 0.94
GLI3P10071 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
GLI3P10071 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GLI3P10071 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.94■□□□□ 0.94
GLI3P10071 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.94■□□□□ 0.94
GLI3P10071 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GLI3P10071 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GLI3P10071 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
GLI3P10071 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GLI3P10071 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GLI3P10071 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.94■□□□□ 0.94
GLI3P10071 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GLI3P10071 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.94■□□□□ 0.94
GLI3P10071 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.94■□□□□ 0.94
GLI3P10071 AC126915.1-201ENST00000522847 1038 ntBASIC20.94■□□□□ 0.94
GLI3P10071 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GLI3P10071 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.94■□□□□ 0.94
GLI3P10071 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms